ANA. RODRÍGUEZ-PEDROUZO, JAVIER CISNEROS, DIANA MARTÍNEZ-MATAMOROS, DIEGO REY-VARELA, MIGUEL BALADO, MANUEL L. LEMOS, JAIME RODRÍGUEZ, MONICA. FOLGUEIRA, AND CARLOS JIMÉNEZ,

Título " Detection of Aeromonas salmonicida subsp. salmonicida infection in zebrafish by labelling bacteria with GFP and a fluorescent probe based on the siderophore amonabactin "
Microbial Pathogenesis  185, 106394, 2025

DOI://10.1016/j.micpath.2023.106394

LARISSA BUEDENBENDER, LUCÍA AGEITOS, MARTA A. LAGES, CARLOS PLATAS-IGLESIAS, MIGUEL BALADO, MANUEL L. LEMOS, JAIME RODRÍGUEZ, AND CARLOS JIMÉNEZ 
O versus S Metal Coordination of the Thiocarboxylate Group: An NMR Study of the two Tautomeric Forms of the Ga(III)-Photoxenobactin E Complex

Inorganic Chemistry 2024, 63, 4176

DOI: 10.1021/acs.inorgchem.3c04076

NADINE KHADRAOUI, RYM ESSID, BILEL DAMERGI, NADIA FERES, DORRA GHARBI, ABEL MATEO FORERO, JAIME RODRÍGUEZ, GHASSEN ABID, ERIKA-BEÁTA KEREKES, FERID LIMAM; CARLOS JIMÉNEZ, AND OLFA TABBENE

Myrtus communis leaf compounds as novel inhibitors of quorum sensing-regulated virulence factors and biofilm formation: in vitro and in silico investigations

Biofilm 2024, 8, 10020

DOI: 10.1016/j.bioflm.2024.100205

ANDRES M. FRANCESCH, KEITH B. GLASER, MARCEL JASPARS, CARLOS JIMÉNEZ, HENDRIK LUESCH, ALEJANDRO MS MAYER, DAVID J. NEWMAN, MARSHA L. PIERCE, ORAZIO TAGLIALATELA-SCAFATI

Pharmaceuticals from marine sources: past, present and future

The Pharmaceutical Journal 2024, 313, 7987

DOI: 10.1211/PJ.2024.1.324083

ANA RUIZ-MOLINA, DAWRIN PECH-PUCH, RAMÓN E. MILLÁN, LUCIA AGEITOS, HAROLD VILLEGAS-HERNÁNDEZ, JERÓNIMO PACHÓN, JOSÉ PÉREZ SESTELO, JAVIER SÁNCHEZ-CÉSPEDES, JAIME RODRÍGUEZ, AND CARLOS JIMÉNEZ

Uncovering the Potent Antiviral Activity of the Sesterterpenoids from the Sponge Ircinia felix against Human Adenoviruses: from the Natural Source to the Total Synthesis

Chemistry European Journal  2024, e20240184

http://dx.doi.org/10.1002/chem.202401844

M. CARMEN DE LA FUENTE, LUCÍA AGEITOS, MARTA A. LAGES, DIANA MARTÍNEZ-MATAMOROS, ABEL M. FORERO, MIGUEL BALADO, MANUEL L. LEMOS, JAIME RODRÍGUEZ, CARLOS JIMÉNEZ
Structural requirements for Ga³⁺ coordination in synthetic analogues of the siderophore piscibactin deduced by chemical synthesis and DFT calculations.
Inorganic Chemistry 2023, 62, 7503- 7514
DOI: doi.org/10.1021/acs.inorgchem.3c00787

DAWRIN PECH-PUCH, DIANA GRILO, SUSANA EUNICE CALVA-PÉREZ, ANDREIA PEDRAS, HAROLD VILLEGAS-HERNÁNDEZ, SERGIO GUILLÉN-HERNÁNDEZ, RAUL DÍAZ-GAMBOA, MATEO FORERO TUNJANO, JAIME RODRÍGUEZ, OSCAR A. LENIS-ROJAS, CARLOS JIMÉNEZ, CATARINA PIMENTEL
Antifungal Potential of Marine Organisms of the Yucatan Peninsula (Mexico) against Medically Important Candida spp. Molecules, 2023, 28, 606.
Doi: 10.3390/molecules28020606

BILEL DAMERGI; RYM ESSID; NADIA FERES; NADINE KHADRAOUI; LUCÍA AGEITOS; AMENI BEN ALAYA; DORRA GHARBI; ISLEM ABID; MONERAH RASHED ALOTHMAN; FERID LIMAM; JAIME RODRÍGUEZ; CARLOS JIMÉNEZ, OLFA TABBENE
Antioxidant, antimicrobial, and anti-inflammatory activity of Datura stramonium flower extract: Identification of active compounds and molecular docking analysis.
Molecules 2023, 28, 5195:
DOI: doi.org/10.3390/molecules28135195

SUSANA P. GAUDÊNCIO, ENGIN BAYRAM, LADA LUKIĆ BILELA, MERCEDES CUETO, ANA R. DIAZ-MARRERO, BERAT HAZNEDAROGLU, CARLOS JIMENEZ, MANOLIS MANDALAKIS, FLORBELA PEREIRA, FERNANDO REYES, DENIZ TASDEMIR
Advanced Methods for Natural Products Discovery: Bioactivity Screening, Dereplication, Metabolomics Profiling, Genomic Sequencing, Databases and Informatic Tools, and Structure Elucidation
Marine Drugs, 2023, 21, 308
DOI: doi.org/10.3390/md21050308

ANA. RODRÍGUEZ-PEDROUZO, JAVIER CISNEROS, DIANA MARTÍNEZ-MATAMOROS, DIEGO REY-VARELA, MIGUEL BALADO, MANUEL L. LEMOS, JAIME RODRÍGUEZ, MONICA. FOLGUEIRA, AND CARLOS JIMÉNEZ,
Detection of Aeromonas salmonicida subsp. salmonicida infection in zebrafish by labelling bacteria with GFP and a fluorescent probe based on the siderophore amonabactin
Microbial Pathogenesis 2023, 185, 106394
doi.org/10.1016/j.micpath.2023.106394

JUAN CARLOS FUENTES-MONTEVERDE, MARVIN J. NÚÑEZ, OSCAR AMAYA-MONTEROSA, MORENA L. MARTÍNEZ, JAIME RODRÍGUEZ, AND CARLOS JIMÉNEZ,
Multistage detection of Tetrodotoxin traces in Diodon hystrix collected in El Salvador Toxins 2023, 15, 308
DOI: doi.org/10.3390/toxins15070409

OUMAIMA LAFI, RYM ESSID, LAURENCE LACHAUD, CARLOS JIMENEZ, JAIME RODRÍGUEZ, LUCÍA AGEITOS, RIDHA MHAMDI, LEILA ABAZA
Synergistic antileishmanial activity of erythrodiol, uvaol, and oleanolic acid isolated from olive leaves of cv. Chemlali
3 Biotech 2023, 13, 395
doi.org/10.1007/s13205-023-03825-3

MARTA A. LAGES, M. CARMEN DE LA FUENTE, LUCÍA AGEITOS, DIANA MARTÍNEZ-MATAMOROS, JAIME RODRÍGUEZ, MIGUEL BALADO, CARLOS JIMÉNEZ, MANUEL L. LEMOS
FrpA is the outer membrane piscibactin transporter in Vibrio anguillarum: structural elements in synthetic piscibactin analogues required for transport. Journal of Biological Inorganic Chemistry 2022, 27, 133
Doi: 10.1007/s00775-021-01916-1

JAVIER CISNEROS-SUREDA, DIEGO REY-VARELA, JAIME RODRÍGUEZ, MIGUEL BALADO, MANUEL L. LEMOS, CARLOS JIMÉNEZ
Selective detection of Aeromonas spp. by a fluorescent probe based on the siderophore amonabactin. Journal of Inorganic Biochemistry 2022, 230, 111743.
Doi: 10.1016/j.jinorgbio.2022.111743

GUILLERMO TARAZONA, RAMÓN MILLAN; ROGELIO FERNANDEZ, MARTA PÉREZ, CARLOS JIMÉNEZ, JAIME RODRIGUEZ, CARMEN CUEVAS
Enigmazole C: A Cytotoxic Macrocyclic Lactone and Its Ring-Opened Derivatives from a New Species of Homophymia Sponge.  Journal of Natural Products 2022, 85, 1059
Doi: 10.1021/acs.jnatprod.1c01179

DAWRIN PECH-PUCH, ABEL M. FORERO, JUAN CARLOS FUENTES-MONTEVERDE, CRISTINA LASARTE-MONTERRUBIO MARTA MARTINEZ-GUITIAN, CARLOS GONZÁLEZ-SALAS, SERGIO GUILLÉN-HERNÁNDEZ, HAROLD VILLEGAS-HERNÁNDEZ, ALEJANDRO BECEIRO, CHRISTIAN GRIESINGER, JAIME RODRÍGUEZ, CARLOS JIMÉNEZ
Antimicrobial Diterpene Alkaloids from an Agelas citrina Sponge Collected in the Yucatán Peninsula.  Marine Drugs 2022, 20, 298
Doi: 10.3390/md20050298

REBECA ALVARIÑO, AMPARO ALFONSO, DAWRIN PECH-PUCH, SANDRA GEGUNDE, JAIME RODRÍGUEZ, MERCEDES R. VIEYTES, CARLOS JIMÉNEZ, LUIS M. BOTANA
Furanoditerpenes from Spongia tubulifera display mitochondrial-mediated neuroprotective effects by targeting cyclophilin D.
ACS Chemical Neuroscience, 2022, 13, 2449.
Doi: 10.1021/acschemneuro.2c00208

JUAN CARLOS FUENTES-MONTEVERDE, NILAMONI NATH, ABEL M. FORERO, ELENA M. BALBOA, ARMANDO NAVARRO VAZQUEZ, CHRISTIAN GRIESINGER, CARLOS JIMÉNEZ, JAIME RODRÍGUEZ
Connection of Isolated Stereoclusters by Combining ¹³C-RCSA, RDC, and J-Based Configurational Analyses and Structural Revision of a Tetraprenyltoluquinol Chromane Meroterpenoid from Sargassum muticum.  Marine Drugs 2022, 20, 462.
Doi: 10.3390/md20070462

MARTA A. LAGES, LUCÍA AGEITOS, JAIME RODRÍGUEZ, CARLOS JIMÉNEZ, MANUEL L. LEMOS, MIGUEL BALADO
Identification of key functions required for production and utilization of the siderophore piscibactin encoded by the High-Pathogenicity Island irp-HPI in Vibrionaceae. International Journal of Molecular Sciences. 2022, 23, 8865
Doi: 10.3390/ijms23168865

FABIÁN GALVIS, LUCÍA AGEITOS, JAIME RODRÍGUEZ, JUAN L BARJA, CARLOS JIMÉNEZ, MANUEL L. LEMOS, MIGUEL BALADO
"Vibrio neptunius produces piscibactin and amphibactin and both siderophores contribute significantly to virulence for clams”
Frontiers in Cellular and Infection Microbiology 2021, 11, 750567
doi.org/10.3389/fcimb.2021.750567

KELLY CONDE-PÉREZ, JUAN C. VÁZQUEZ-UCHA, LAURA ÁLVAREZ-FRAGA, LUCÍA AGEITOS, SORAYA RUMBO-FEAL, MARTA MARTÍNEZ-GUITIÁN, NOELIA TRIGO-TASENDE, JAIME RODRÍGUEZ, GERMÁN BOU, CARLOS JIMÉNEZ, ALEJANDRO BECEIRO, MARGARITA POZA
In-depth analysis of the role of the acinetobactin cluster in the virulence of Acinetobacter baumannii. Frontiers in Cellular and Infection Microbiology. 2021, 11, 750
Doi: 10.3389/fcimb.2021.750567

CARLOS JIMÉNEZ
Capítulo de libro:
“Siderophores from Fish Pathogenic Bacteria”. In: Kiyota H. (eds) Marine Natural Products.
Topics in Heterocyclic Chemistry, 2021 vol 58, pag. 175 Springer, Singapore
Doi: 10.1007/7081_2021_53
Print ISBN 978-981-16-4636-2
Online ISBN 978-981-16-4637-9

CARMEN DE LA FUENTE, YURI SEGADE, KATHERINE VALDERRAMA, JAIME RODRÍGUEZ, AND CARLOS JIMÉNEZ
Convergent Total Synthesis of the Siderophore Piscibactin as its Ga³⁺ complex. Organic Letters 2021, 23, 340
Doi: 10.1021/acs.orglett.0c03850

DAWRIN PECH-PUCH; PEDRO JOSEPH-NATHAN; ELEUTERIO BURGUEÑO-TAPIA; CARLOS GONZÁLEZ-SALAS; DIANA MARTINEZ; DAVID PEREIRA; RENATO PEREIRA, CARLOS JIMÉNEZ AND JAIME RODRÍGUEZ
Absolute Configuration by Vibrational Circular Dichroism of Anti-inflammatory Macrolide Briarane Diterpenoids from the Gorgonian Briareum asbestinum Scientific Reports 2021, 11, 496
Doi: 10.1038/s41598-020-79774-1

GABRIEL MONZÓN DAZA, CAROLINA MENESES MACÍAS, ABEL M. FORERO, JAIME RODRÍGUEZ, MARCELA ARAGÓN, CARLOS JIMÉNEZ, FREDDY ALEJANDRO RAMOS, AND LEONARDO CASTELLANOS
Identification of α-amylase and α-glucosidase inhibitors and ligularoside A, a new triterpenoid saponin from Passiflora ligularis Juss (Sweet Granadilla) leaves by NMR based metabolomic study. Journal of Agricultural and Food Chemistry 2021, 69, 2919
Doi: 10.1021/acs.jafc.0c07850

BERTALAN JUHASZ, DAWRIN PECH-PUCH, JIOJI N. TABUDRAVU, BASTIEN CAUTAIN, FERNANDO REYES, CARLOS JIMÉNEZ, KWAKU KYEREMEH AND MARCEL JASPARS
Dermacozine N, the first natural linear pentacyclic oxazinophenazine with UV-Vis absorption maxima in the near infrared region, along with dermacozines O and P isolated from the Mariana Trench sediment strain Dermacoccus abyssi MT 1.1T. Marine Drugs 2021, 19, 325 
Doi: 10.3390/md19060325

FABIÁN GALVIS, LUCÍA AGEITOS, DIANA MARTÍNEZ-MATAMOROS, JUAN L. BARJA, JAIME RODRÍGUEZ, MANUEL L. LEMOS CARLOS JIMÉNEZ AND MIGUEL BALADO,
The marine bivalve molluscs pathogen Vibrio neptunius produces the siderophore amphibactin which is widespread in molluscs microbiota"
Environmental Microbiology 2020,  22, 5467–5482
DOI: 10.1111/1462-2920.15312

DAWRIN PECH-PUCH, JUDITH BERASTEGUI-CABRERA, MAR PEREZ-POVEDANO, HAROLD VILLEGAS-HERNANDEZ, SERGIO GUILLÉN-HERNÁNDEZ, BASTIEN CAUTAIN, FERNANDO REYES, JERÓNIMO PACHÓN, PATRICIA GÓMEZ, JAIME RODRÍGUEZ, CARLOS JIMÉNEZ, AND JAVIER SÁNCHEZ-CÉSPEDES
Antiviral and antiproliferative potential of marine organisms from the Yucatan Peninsula, Mexico
Frontiers in Marine Science, section Marine Biotechnology 2020, 7, 607
doi: 10.3389/fmars.2020.00607

DAWRIN PECH-PUCH, MAR PEREZ-POVEDANO, MARTA MARTINEZ-GUITIAN, CRISTINA LASARTE-MONTERRUBIO, JUAN CARLOS VÁZQUEZ-UCHA, MARÍA LOURDES NOVOA-OLMEDO, GERMÁN BOU, JAIME RODRÍGUEZ, ALEJANDRO BECEIRO, AND CARLOS JIMÉNEZ
Marine organisms from the Yucatan Peninsula (Mexico) as a potential natural source of new antibacterial compounds"

Marine Drugs 2020, 18, 369
doi:10.3390/md18070369

DAWRIN PECH-PUCHA, MAR PEREZ-POVEDANO, MARTA MARTINEZ-GUITIAN, CRISTINA LASARTE-MONTERRUBIO, JUAN CARLOS VÁZQUEZ-UCHA, GERMÁN BOU, JAIME RODRÍGUEZ, ALEJANDRO BECEIRO, AND CARLOS JIMÉNEZ
In Vitro and In Vivo Assessment of the Efficacy of Bromoageliferin, an Alkaloid Isolated from the Sponge Agelas dilatata, against Pseudomonas aeruginosa

Marine Drugs  2020, 18, 336
doi:10.3390/md18060326

DIANA MARTÍNEZ-MATAMOROS, SOCORRO CASTRO-GARCÍA, GABRIELA OJEDA ROMANO, MIGUEL BALADO, JAIME RODRÍGUEZ, MANUEL L. LEMOS AND CARLOS JIMÉNEZ
Synthesis of functionalized magnetic nanoparticles, their conjugation with the siderophore feroxamine and its evaluation for bacteria detection

Journal of Visulalize Experiments (JoVE)  2020, 160:e60842

DOI: 10.3791/6084

NILAMONI NATH, JUAN CARLOS Fuentes-Monteverde, DAWRIN PECH-PUCH, JAIME RODRÍGUEZ, CARLOS JIMÉNEZ, MARKUS NOLL, ALEXANDER KREITER, MICHAEL REGGELIN, ARMANDO NAVARRO-VÁZQUEZ, AND CHRISTIAN GRIESINGER
Relative configuration of micrograms of natural compounds using proton residual chemical shift anisotropy"
Nature Communications 2020, 11, 4372 
doi:10.1038/s41467-020-18093-5

Marine Natural Products from the Yucatan Peninsula
Dawrin Pech-Puch, Mar Pérez-Povedano, Oscar A. Lenis-Rojas Jaime Rodríguez and Carlos Jiménez
Marine Drugs 2020, 18, 59
doi:10.3390/md18010059

The fish pathogen Vibrio ordalii produces under iron deprivation produces the siderophore piscibactinPamela Ruiz, Miguel Balado, Christian Hidalgo, Rodolfo Paredes, Alicia E. Toranzo, Juan Carlos Fuentes-Monteverde, Jaime Rodríguez, Carlos Jiménez, Rubén Avendaño-Herrera and Manuel L. Lemos
Microorganisms 2019, 7, 313
doi:10.3390/microorganisms7090313

The Outer Membrane Protein FstC of Aeromonas salmonicida subps. salmonicida Acts as Receptor for Amonabactin Siderophores and Displays a Wide Ligand Plasticity. Structure-Activity Relationships of Synthetic Amonabactin Analogues
Diego Rey-Varela, Javier Cisneros-Sureda, Miguel Balado, Jaime Rodríguez, Manuel L. Lemos and Carlos Jiménez
ACS Infectious Diseases 2019, 5, 1936-1951
Doi: 10.1021/acsinfecdis.9b00274

Outer membrane protein FrpA, the siderophore piscibactin receptor of Photobacterium damselae subsp. piscicida, as a subunit vaccine against photobacteriosis in sole (Solea senegalensis)
Katherine Valderrama, Miguel Balado, Diego Rey, Jaime Rodríguez, Anton Vila, Carlos Jiménez and Manuel L. Lemos
Fish and Shellfish Inmunology 2019, 94, 723-729.
doi.org/10.1016/j.fsi.2019.09.066 

Cytotoxic furanoditerpenes isolated from the sponge Spongia tubulifera collected in the Mexican Caribbean
Dawrin Pech-Puch, Jaime Rodríguez, Carlos Alfredo Sandoval-Segura and Carlos Jiménez
Marine Drugs 2019, 17, 416
DOI: 10.3390/md17070416

Anti-inflammatory effects of 5α,8α-epidioxycholest-6-en-3β-ol, a steroidal endoperoxide isolated from Aplysia depilans through bioguided fractionation and NMR Anaylisis
Renato B. Pereira, David M. Pereira, Carlos Jiménez, Jaime Rodríguez, Rosa M. Nieto, Romeu Videira, Olga Silva, Paula B. Andrade and Patrícia Valentão
Marine Drugs 2019, 17, 330
DOI: 10.3390/md17060330

Combining JCBA and Marfey’s Methodology to Determine the Absolute Configuration of Threonines: The case of Gunungamide A, a New Cyclic Depsipeptide Containing Chloropyrrole from the Sponge Discodermia sp.
Guillermo Tarazona, Rogelio Fernandez, Patricia Cruz, Marta Pérez, Jaime Rodriguez, Carlos Jiménez and Carmen Cuevas
Organic Chemistry Frontiers. 2019, 6, 15-21,
DOI: 10.1039/c8qo00961a

Preparation of functionalized Magnetic Nanoparticles conjugated with feroxamine and their application for pathogen detection
Diana Martinez-Matamoros, Socorro Castro-García, Miguel Balado, Adriana Matamoros-Veloz, Miller Alonso Camargo-Valero, Oscar Cespedes, Jaime Rodríguez, Manuel L. Lemos and Carlos Jiménez
RSC Advances, 2019, 9, 13533-13542
DOI: 10.1039/c8ra10440a

Marine natural Products in medicinal chemistry
Carlos Jiménez
ACS Medicinal Chemistry Letters 2018, 10, 959-961
DOI: 10.1021/acsmedchemlett.8b00368

AHL-lactonase expression in three marine emerging pathogenic Vibrio spp. reduces virulence and mortality in brine shrimp (Artemia salina) and Manila clam (Venerupis philippinarum)
Marta Torres, José Carlos Reina, Juan Carlos Fuentes-Monteverde, Gerardo Fernández, Jaime Rodríguez, Carlos Jiménez and Inmaculada Llamas
PlosOne 2018, 13, e0195176
doi.org/10.1371/journal.pone.0195176

Njaoamine I, a cytotoxic polycyclic alkaloid from the Haplosclerida sponge Haliclona (Reniera) sp.
Carlos Urda, Marta Pérez, Rogelio Fernández, Jaime Rodríguez, Carlos Jiménez and Carmen Cuevas
Tetrahedron Letters 2018, 59, 2577-2580                                              
doi.org/10.1016/j.tetlet.2018.05.059

Peruvioses A to F, sucrose esters from the exudate of Physalis peruviana fruit as α-amylase inhibitors
Carlos-A. Bernal, Leonardo Castellanos, Diana M. Aragón, Diana Martinez-Matamoros, Carlos Jiménez, Yolima Baena and Freddy A. Ramos
Carbohydrate Research, 2018, 461, 4-10.
DOI.org/10.1016/j.carres.2018.03.003

The Siderophore piscibactin Is a relevant virulence Factor for Vibrio anguillarum favored at low temperatures
Miguel Balado, Marta A. Lages, Juan C. Fuentes-Monteverde, Diana Martinez-Matamoros, Jaime Rodríguez, Carlos Jiménez and Manuel L. Lemos
Frontiers in Microbiology 2018, 9,1766.   
DOI: 10.3389/fmicb.2018.01766

Can Stereoclusters Separated by two Methylene Groups Be Related by DFT Studies? The case of the Cytotoxic Meroditerpenes Halioxepines
Guillermo Tarazona, Gonzalo Benedit, Rogelio Fernandez, Marta Perez, Jaime Rodriguez, Carlos Jiménez and Carmen Cuevas
Journal of Natural Products, 2018, 81, 343-348
DOI: 10.1021/acs.jnatprod.7b00807

Synthesis of Thelepamide via Catalyst-Controlled 1,4-Addition of Cysteine Derivatives and Structure Revision of Thelepamide 
Tobias Seitz, Ramón E. Millán, Dieter Lentz, Carlos Jiménez, Jaime Rodríguez and Mathias Christmann
Organic Letters, 2018, 20, 594-597
DOI: 10.1021/acs.orglett.7b03706

Daedophamide, a Cytotoxic Cyclodepsipeptide from the Sponge Daedalopelta sp collected in Indonesia
Carlos Urda, Rogelio Fernandez, Jaime Rodriguez, Marta Pérez, Carlos Jiménez and Carmen Cuevas
Journal of Natural Products, 2017, 80, 3054-3059
DOI: 10.1021/acs.jnatprod.7b00678

Structure-Based Design, Synthesis, and Biological Evaluation of Withaferin A-analogues as Potent Apoptotic Inducers
Gabriel G. Llanos, Liliana M. Araujo Ignacio A. Jiménez, Laila M. Moujir, Jaime Rodríguez, Carlos Jiménez, and Isabel L. Bazzocchi
European Journal of Medicinal Chemistry 2017, 140, 52-64.
doi: 10.1016/j.ejmech.2017.09.004

Citrate Serves as Iron Carrier for the Marine Pathogen Photobacterium damselae subsp damselae
Miguel Balado, Beatriz Puentes, Lucía Couceiro, Juan C. Fuentes-Monteverde, Jaime Rodríguez, Carlos R. Osorio, Carlos Jiménez and Manuel L. Lemos
Frontiers in Cellular and Infection Microbiology. 2017, 7, 361.
doi: 10.3389/fcimb.2017.00361

Bistratamides M and N, oxazole-thiazole containing cyclic hexapeptides isolated from Lissoclinum bistratum. Interaction of zinc (II) with bistratamide K
Carlos Urda, Rogelio Fernandez, Jaime Rodriguez, Marta Pérez, Carlos Jiménez and Carmen Cuevas
Marine Drugs, 2017, 15, 209.
DOI: 10.3390/md15070209

Cytotoxic Anomoian B and Aplyzanzine B, New Bromotyrosine Alkaloids from Indonesian Sponges
Guillermo Tarazona, Gema Santamaría, Patricia G. Cruz, Rogelio Fernández, Marta Pérez, Juan Fernando Martínez-Leal, Jaime Rodriguez, Carlos Jiménez and Carmen Cuevas
ACS Omega 2017, 2, 3494-3501.
DOI: 10.1021/acsomega.7b00417

Protoxenicins A and B, cytotoxic long chain acylated xenicanes from the soft coral Protodendron repens
Carlos Urda, Rogelio Fernandez, Marta Pérez, Jaime Rodriguez, Carlos Jiménez, Carmen Cuevas, Journal of Natural Products 2017, 80, 713-719.
doi.org/10.1021/acs.jnatprod.7b00046

Identification of the Ferri-Acinetobactin Outer Membrane Receptor in Aeromonas salmonicida subsp salmonicida and Structure-Activity Relationships of Synthetic Acinetobactin Analogues Miguel Balado, Yuri Segade, Diego Rey, Carlos R. Osorio, Jaime Rodríguez, Manuel L. Lemos, y Carlos Jiménez, ACS Chemical & Biology 12, 479-493, 2017
DOI: 10.1021/acschembio.6b00805

Cereusitin A: A Cyclic tetrapeptide from a Bacillus cereus strain isolated from the soft coral Antillogorgia (syn. Pseudopterogorgia) elisabethae ANGELA PINZÓN-ESPINOSA, DIANA MARTINEZ-MATAMOROS, LEONARDO CASTELLANOS, CARMENZA DUQUE, JAIME RODRIGUEZ, CARLOS JIMÉNEZ Y FREDDY ALEJANDRO RAMOS Tetrahedron Letters, 58-634- 637, 2017
DOI: 10.1016/j.tetlet.2017.01.002

Pembamide, a N-Methylated Linear Peptide from a sponge Cribrochalina sp Carlos Urda, Marta Pérez, Jaime Rodriguez, Carlos Jiménez, Carmen Cuevas y Rogelio Fernandez Tetrahedron Letters 57, 3239-3242, 2016
doi.org/10.1016/j.tetlet.2016.05.054

Lanesoic Acid: An Cytotoxic Zwitterion from Theonella sp Jaime Rodriguez, Carlos Jiménez, Maria Blanco, Guillermo Tarazona, Rogelio Fernandez y Carmen Cuevas Organic Letters 18, 5832-5835, 2016
DOI: 10.1021/acs.orglett.6b02832

Insights into the virulence-related genes of Edwardsiella tarda isolated from turbot in Europe: genetic homogeneity and evidence for vibrioferrin production. N. Castro, C. Osorio, N. Bujan, Juan Carlos Fuentes-Monteverde, Jaime Rodriguez, M. Romero, Carlos Jimenez, A. E. Toranzo. B. Magariños Journal of Fish Diseases 39, 565-576, 2016

Cytotoxic and Antimicrobial Diterpens Isolated from Hyptis dilatata Fausto Álvarez, Edisson Tello, Katherine Bauer, Luis Eduardo Díaza,; Jaime Rodríguez, y Carlos Jiménez Current Bioactive Compounds   11, 189-197, 2015

3-Nitroasterric acid derivatives from the Antarctic sponge-derived fungus Pseudogymnoascus sp . Luis Figueroa, Carlos Jiménez, Jaime Rodríguez, Carlos Areche, Renato Chávez, Marlene Henríquez, Mercedes De La Cruz, Caridad Díaz, Yuri Segade, Inmaculada Vaca Journal of Natural Products 78, 919-:923, 2015

Mass Spectrometry Detection of Minor New Meridianins from the Antarctic Colonial Ascidian Aplidium falklandicum (A. meridianum) Laura Núñez-Pons, Rosa Maria Nieto, Conxita Avila, Carlos Jimenez , Jaime Rodríguez Journal of Mass Spectrometry 50, 103-111, 2015

Photodamage attenuation effect by a tetraprenyltoluquinol chromane meroterpenoid isolated from Sargassum muticum E.M. Balboa, Y.-X. Lic, B.-N. Ahnc, S.-H. Eomc, H. Domínguez, Carlos Jimenez, Jaime Rodríguez Journal of Photochemistry and Photobiology B: Biology, 148, 51-58, 2015

A transmissible plasmid-borne pathogenicity island encodes piscibactin biosynthesis in the fish pathogen Photobacterium damselae subsp. Piscicida. Carlos Osorio, Amable Rivas, Miguel Balado, Juan Carlos Fuentes-Monteverde, Jaime Rodriguez, Carlos Jimenez, Manuel Lemos, and Matthew Waldor Appl. Environ. Microbiol, 81, 5867-5879, 2015
DOI: 10.1128/AEM.01580-15

Acinetobactin and Amonabactin, two catechol siderophores sharing part of the biosynthetic pathway, are simultaneously produced by Aeromonas salmonicida N Miguel Balado, Alba Souto, Ana Vences, Valeria P. Careaga, Katherine Valderrama, Yuri Segade, Jaime Rodríguez, Carlos R. Osorio, Carlos Jiménez, Manuel L. Lemos ACS Chemical Biology, 10, 2850-2860, 2015

El papel de los productos naturales en el mercado farmacéutico actual
Carlos Jiménez
Anales de Química, 109, 134-141, 2013

Synthesis and antibacterial activity of conjugates between norfloxacin and analogues of the siderophore vanchrobactin
Alba Souto, Marcos A. Montaos, M. Balado, G. Osorio, Jaime Rodríguez, Manuel L. Lemos, Carlosa Jiménez
Bioorg. Med. Chem. 21, 294-301, 2013

Connecting discrete stereoclusters by using DFT and NMR spectroscopy: The case of nivariol
F. Cen-Pacheco, J. Rodríguez, M. Norte, J. J. Fernández, A. Hernández Daranas
Chem. - A Eur. J. 19, 8525–8532, 2013

Structure and Biosynthetic Assembly of Piscibactin, a Siderophore from Photobacterium damselae subsp piscicida, predicted from genome analysis
Alba Souto, A. J Montaos, A. J. Rivas; M. Balado; G. Osorio, Jaime Rodríguez, M. L. Lemos, Carlos Jiménez
Eur J. Org. Chem. 5693-5700, 2012

Signaling the induction of sporulation involves the interaction of two secondary metabolites in Aspergillus nidulans.
Begoña Rodríguez-Urra, Carlos Jiménez, M. Isabel Nieto, Jaime Rodríguez, H. Hayashi, Unai Ugalde.
ACS Chem. Biol. 7, 599-606, 2012

Natural Products from Antarctic Colonial Ascidians of the Genera Aplidium and Synoicum: Variability and Defensive Role.
Laura Núñez-Pons, M. Carbone, J. Vázquez, Jaime Rodríguez, Rosa M. Nieto, M. M. Varelavagnin, Conxita Avila.
Mar. Drugs 10, 1741-1764, 2012

Jaime Rodriguez, Phillip Crews, Marcel Jaspars. “Handbook of Marine Natural Products. Contemporary Strategies in Natural Products Structure Elucidation”. Chapter 7. Springer Science-Business Media B.V. E. Fattorusso, W. H. Gerwick, O. Taglialatela-Scafati, (eds.). Springer Dordrecht, Heildelberg, New York, London, pp 423-517. ISBN: 978-90-481-3856 (print), 978-90-481-3840-0 (electronic), 2012.

Absolute Stereochemistry of Antifouling Cembranoid Epimers at C-8 from the Caribbean Octocoral Pseudoplexaura flagellosa. Revised Structures of Plexaurolones
E. Tello, L. Castellanos, C. Arevalo-Ferro, Jaime Rodríguez, Carlos Jiménez, Carmenza Duque.
Tetrahedron 67, 9112-9121, 2011

Iron(III) complexation by Vanchrobactin, a siderophore of the bacterial fish pathogen Vibrio anguillarum
Emilia Iglesias, Isabel Brandariz, Carlos Jiménez, Raquel G. Soengas.
Metallomics  3, 521- 528, 2011

NMR methods for unravelling the spectra of complex mixtures.
R. Novoa-Carballal, E. Fernandez-Megia, Carlos Jiménez, R. Riguera.
Nat Prod. Rep. 28, 78-98, 2011

An approach to speed up the Isolation of Hydrophilic Metabolites from Natural Sources at Semipreparative Level by using a HLB/MCX- HPLC/MS system.
Alfonso Espada, Cristina Anta, A. Bragado, Jaime Rodríguez, Carlos Jiménez
J. Chromatogr. A 1218, 1790-11754, 2011

Highly diasteroselective indium mediated synthesis of β-lactam carbohydrates from imines.
Raquel G. Soengas, Yuri Segade, Carlos Jiménez, Jaime Rodríguez.
Tetrahedron 67, 2617-2622, 2011

Tertiary interactions between helices h13 and h44 in 16S RNA contribute to the fidelity of translation
Dk Tran, J. Finley, Anton Vila-Sanjurjo, A. Lale, Q. Sun , M. O’Connor
FEBS J. 278, 4405-4412, 2011

Chemical ecology of tunicates of the genus Aplidium from the Weddell Sea (Antarctica)
A L.aura Núñez-Pons, R. Forestieri, R. María Nieto, M. Varela, M. Nappo, Jaime Rodríguez, Carlos Jiménez, F. Castelluccio, A. Ramos-Espla, M. Gavagnin, C. Ávila.
Polar Biol. 2010, 33, 1319-1329

Synthesis of a new cytotoxic cephalostatin/ritterazine analogue from hecogenin and 22-epi-hippuristanol
Jesús J. Poza, Jaime Rodríguez, Carlos Jiménez.
Bioorg. Med. Chem. 2010, 18, 58-63

Low Temperature NMR J-Based Configurational Analysis of Flexible Acyclic Systems.
Ana Ardá, M. Isabel Nieto, María Blanco, Carlos Jiménez, Jaime Rodríguez.
J. Org. Chem. 2010, 75, 7227-7232.

Mutagenesis of m5U1939 and ?2504 of Escherichia coli 23S rRNA: Effects on fidelity and antibiotic resistances
C. Persaud, Y. Lu, A. Vila-Sanjurjo, J. L. Campbell, J. Finley, M. O’Connor
Biochem. Biophys. Res. Commun., 2010, 392, 223-227.

Mutations in the intersubunit bridge regions of 16s rrna affect decoding and subunit-subunit interactions on the 70s ribosome
Q. Sun, A. Vila-Sanjurjo, M. O’Connor
Nucleic Acids Res. 2010, 39, 3321-3330

The effect of different tillage and residue management practices on soil bacterial communities: Phylogenetic and multivariate analyses
J. A. Ceja-Navarro, F. N. Rivera-Orduña, L. Patiño-Zúñiga, A. Vila-Sanjurjo, J. Crossa, B. Govaerts, L. Dendooven
Appl. Environ. Microbiol. 2010, 76, 3685-3691.

Phillip Crews, Jaime Rodríguez, Marcel Jaspars. Instructor’s CD Resource for Organic Structure Analysis 2nd Edition. CD ISBN: 978-0-19-539395-8, 2010

Molecular characterization of soil bacterial communities in contrasting zero tillage systems
J. A.Ceja-Navarro, F. N. Rivera, L. Patiño-Zúñiga, G.Govaerts, R. Marsch, A. Vila-Sanjurjo, L.Dendooven
Plant Soil 2009, 329, 127-137

El Ribosoma y la Traducción Genética
D. A. Colón-Ramos, A. Vila Sanjurjo
Investigación y Ciencia 2009, 49-57

A Mild Oxidative Method for the Preparation of ?-Hydroxy-?-nitroolefins from ?,?-Epoxyketoximes using IBX.
Alba Souto, Jaime Rodríguez, Carlos Jiménez.
Tetrahedron Let. 2009, 50, 7395-7398.

Bicarbonate gradients modulate growth and colony morphology in Aspergillus nidulans
B. Rodríguez-Urra, A. Garzia, Carlos Jiménez, Unai Ugalde
FEMS Microbiol. Lett. 2009, 216-221

Carlos Jiménez. “Estrategias en el desarrollo de nuevos antibacterianos contra la vibriosis a partir de las estructuras de los sideróforos aislados de la bacteria patógena Vibrio anguillarum“ en Tendencias y futuro de la investigación en Parasitología y en Productos Naturales. Memorias del Seminario Internacional ACOFACIEN-ACCEFYN, Bogotá, pp. 339-352, ISBN: 978-958-9205-68-6, 2009

Phillip Crews, Jaime Rodríguez, Marcel Jaspars. “Topics in Organic Chemistry: Organic Structure Analysis” 2nd Edition. Oxford University Press. EEUU. New York. ISBN: 0-19-510102-2, 2009.

Clionapyrrolidine A, A Metabolite from the encrusting and excavating Sponge Cliona tenuis that kills coral tissue upon contact
Chaves-Fonnegra, L. Castellanos, Svean Zea, Carmenza Duque, Jaime Rodríguez, Carlos Jiménez.
J. Chem. Ecol. 2008, 34, 1565-1574

J-Based Analysis and DFT-NMR Assignments to Natural Complex Molecules: Application to 7?,7-Dihydroxy-5,6-epoxycholestanes.
J. J. Poza, Carlos Jiménez, Jaime Rodríguez
Eur. J. Org. Chem. 2008, 3960-3969

Synthesis and Biological Activity of Analogues of Vanchrobactin, a Siderophore from Vibrio anguillarum serotype O2
Raquel G. Soengas, Marta Larrosa, M. Balado, Jaime Rodríguez, Manuel L. Lemos, Carlos Jiménez.
Org. Biomol. Chem. 2008, 6, 1278-1287

Total Synthesis of (-)-Dysithiazolamide.
Ana Ardá, Raquel G. Soengas, M. Isabel Nieto, Carlos Jiménez, Jaime Rodríguez
Org. Lett. 2008, 10, 2175-2178.

Isolation, Biological Significance, Synthesis, and Cytotoxic Evaluation of New Natural Parathiosteroids A-C and Analogues, from the soft coral Paragorgia sp.
J. Javier Poza, Rogelio Fernández, Fernando Reyes, Jaime Rodríguez, Carlos Jiménez
J. Org. Chem. 2008, 73, 7978-7984.

Carlos Jiménez Co-Editor. “Manual de Determinación Estructural de Compuestos Naturales“ Programa Iberoamericano de Ciencia y Tecnología. CYTED; Organización del Convenio Andrés Bello, Bogotá p. xviii + 617 + CD–(Serie Ciencia y Tecnología; no. 159), ISBN: 978-958-698-208-5, 2008.

Carlos Jiménez. “Establecimiento de la configuración absoluta de productos naturales por RMN” (pp 275-305) y “Estrategias en la determinación estructural de glicósidos y poliglicósidos por RMN" (pp 495-525) en Manual de Determinación Estructural de Compuestos Naturales, Programa Iberoamericano de Ciencia y Tecnología. CYTED; Organización del Convenio Andrés Bello, Bogotá, ISBN: 978-958-698-208-5, 2008.

A. Vila-Sanjurjo. “Modification of the Ribosome and the Translational Machinery during Reduced Growth Due to Environmental Stress” en EcoSal-Escherichia coli and Salmonella: cellular and molecular biology. http://www.ecosal.org, Ed. ASM Press., Washington, DC, Vol. Domain 2: Molecular Architecture and Composition of Cells. ISBN: 1555811841, 2008

Stereoselective synthesis of (–)-4- epiaxinyssamine.
Leonardo Castellanos, Carmenza Duque, Jaime Rodríguez, Carlos Jiménez.
Tetrahedron 2007, 63, 1544-1552.

Mycothiazole: Synthesis of the C8-C18 subunit and further evidence of the (Z)-?14 double bond configuration.
Miriam Rega, Paloma Candal, Carlos Jiménez, Jaime Rodríguez
Eur. J. Org. Chem. 2007, 934-942.

6E-Hydroximinosteroid homodimerization by cross metathesis processes.
Miriam Rega, Carlos Jiménez, Jaime Rodríguez
Steroids 2007, 72, 729-735.

Modulation of 16S rRNA function by ribosomal protein S12
Vila-Sanjurjo, Y. Lu, J. L. Aragonez, R. Starkweather, M. Sasikumar, M. O’Connor
Biochim. Biophys. Acta 2007, 1769, 462-471.

Synthesis and Evaluation of New 6- Hydroximinosteroid Analogs as Cytotoxic Agents.
Javier Jesús Poza, Miriam Rega, Vanessa Paz, Beatriz Alonso, Jaime Rodríguez, N. Salvador, A. Fernández, C. Jiménez.
Bioorg. Med. Chem. 2007, 15, 4722-4740.

Vanchrobactin: Absolute Configuration and Total Synthesis
R. G. Soengas, C. Anta, A. Espada, M. Larrosa, J. Rodríguez, M. L. Lemos, C. Jiménez
Tetrahedron Lett 2007, 48, 3021-3024.

O’Connor, M., Bayfield, M., Gregory, S. T., Wyan-Ching M. L., Lodmell, J. S., Mankad, A., Thompson, J. R., Vila-Sanjurjo, A., Squires, C. L., Dahlberg, A. E. “Probing Ribosomal Structure and Function: Analyses with rRNA and Protein Mutants” en The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions, Ed. ASM Press., Washington, DC, Vol. 1769, pp. 462-471. ISBN: 1555811841, 2007

Structural Characterization of Vanchrobactin, a New Catechol Siderophore produced by the Fish Pathogen Vibrio anguillarum serotype O2
R. G. Soengas, C. Anta, Espada, V. Paz, I. R. Ares, M. Balado, J. Rodríguez, M. L. Lemos, C. Jiménez.
Tetrahedron Lett. 2006, 47, 7113-7116

New cytotoxic cembranolides: Isolation, biogenetic studies, and synthesis of analogues.
M. Isabel Nieto, Noemí González, Jaime Rodríguez, Russell G. Kerr, Carlos Jiménez.
Tetrahedron 2006, 62, 11747-1175.

Polychlorinated leucine derivatives: synthesis of (2S,4R)-5,5-dichloroleucine and J-based analysis.
Ana Ardá, Carlos Jiménez, Jaime Rodríguez
Eur. J. Org. Chem. 2006, 3645-3651

Isolation and Synthesis of (-)-(5S)-2-imino-1-methylpyrrolidine-5-carboxylic acid from Cliona tenuis: Structure Revision of pyrostatins
Leonardo Castellanos, Carmenza Duque, Sven Zea, Alfonso Espada, Jaime Rodríguez, Carlos Jiménez
Org. Lett. 2006, 8, 4967-4970

Synthesis of Acetylhomoagmatine
Leonardo Castellanos, Carmenza Duque, Jaime Rodríguez, Carlos Jiménez.
Mar. Drugs 2006, 4, 236-238

NMR J-based Analysis to Nitrogen Containing Moieties and Application to Dysithiazolamide, a New Polychlorinated Dipeptide from Dysidea sp.
Ana Ardá, Jaime Rodríguez, Rosa M. Nieto, Carla Bassarello, Luigi Gomez-Paloma, Giuseppe Bifulco, Carlos Jiménez.
Tetrahedron 2005, 61, 10093-10098

Studies of polychorinated leucine derivatives: synthesis of (2S,4S)-5,5-dichloroleucine.
Ana Ardá, Carlos Jiménez, Jaime Rodríguez.
Tetrahedron Lett. 2004. 45, 3241-3243

New Cytotoxic Cembranes from Cnidaria Gyrophyllum sibogae.
Fernando Reyes, Ana Ardá, Rocio Martín, Rogelio Fernández, Ana Rueda, David Montalvo, Cristina Gómez, Carlos Jiménez, Jaime Rodríguez, José Mª Sánchez-Puelles
J. Nat. Prod. 2004, 67, 1190-1192

New Dammarane Triterpenes from the aerial parts of Ibicella lutea grown in Argentina.
Mario J. Simirgiotis, Carlos Jiménez, Jaime Rodríguez, Oscar S. Giordano, Carlos E. Tonn
J. Nat. Prod. 2003, 66, 1586-1592

Triterpene Glycosides From The Far Eastern Sea Cucumber Cucumaria conicospermium
Sergey A. Avilov, Alexander A. Antonov, Vladimir I. Kalinin, Anatoly I. Kalinovsky, Pavel S. Dmitrenok, Valentin A. Stonik, Ricardo Riguera, Carlos Jimenez
J. Nat. Prod. 2003, 66, 910-916

Evaluation of the effects of several zoanthamine-type alkaloids on the aggregation of human platelets.
Rosa M. Villar, José Gil-Longo, Antonio H. Daranas, María L. Souto, José J. Fernández, Solange Peixinho, Miguel A. Barral, Gilmar Santafé, Jaime Rodríguez, Carlos Jiménez
Bioorg. Med. Chem. 2003, 11, 2301-2306

Triterpene Glycosides from the Deep-Water North-Pacific Sea Cucumber Synallactes nozawai Mitsukuri.
Alexandra S. Silchenko, Sergey A. Avilov, Alexandr A. Antonov, Vladimir I. Kalinin, Anatoly I. Kalinovsky, Alexey V. Smirnov, Ricardo Riguera, Carlos Jiménez
J. Nat. Prod. 2002, 65, 1802-1808

Cyclobutenbriarein A, The First Diterpene With A Tricyclo[8.4.0.03,6]Tetradec-4-Ene Ring System Isolated From The Gorgonian Briareum Asbestinum.
Noemi Gonzalez, Jaime Rodriguez, Russell G. Kerr, Carlos Jiménez
J. Org. Chem. 2002, 67, 5117-5123

Novel Cytotoxic Oxygenated C29 Sterols from the Colombian Marine Sponge Polymastia tenax.
Gilmar Santafe, Vanessa Paz, Jaime Rodriguez, Carlos Jiménez
J. Nat. Prod. 2002, 65, 1161-1164

A New Secosterol from the Indonesian Octocoral Pachyclavularia violacea.
Cristina Anta, Noemi Gonzalez, Jaime Rodriguez, Carlos Jiménez
J. Nat. Prod. 2002, 65, 1357-1359

New Xenia Diterpenoids from the Indonesian Soft Coral Xenia sp.
Cristina Anta, Gilmar Santafe, Noemi Gonzalez, Jaime Rodriguez, Carlos Jiménez
J. Nat. Prod. 2002, 65, 766-768

Carlos Jiménez. ”Esquema general del aislamiento y caracterización de productos naturales bioactivos” en El mar como fuente de moléculas bioactivas, Universidad de León, Secretariado de Publicaciones y Medios Audiovisuales, pp. 143-177, ISBN: 84-7719-796-2, 2002.

Synthesis of Cytotoxic 6-Hydroximino-3-ene Steroids: Structure-Activity Studies.
Noe Deive, Jaime Rodriguez, Carlos Jiménez.
J. Med. Chem. 2001, 44, 2612-2618

New Cytotoxic Steroids from the Gorgonian Isis hippuris. Structure-Activity Studies.
Noemi Gonzalez, Miguel A. Barral, Jaime Rodriguez, Carlos Jiménez.
Tetrahedron 2001, 57, 3487-3497

Synthesis of a New Hapten for generating Catalytic Antibodies that activate Doxorubicin Prodrugs.
Carlos Jiménez, Alfonso Tramontano
Tetrahedron Lett. 2001, 42, 7819-7822

An Enyne Metathesis Approach to the Synthesis of the 1,3 Diene System of Mycothiazole.
Sara Rodríguez-Conesa, Paloma Candal; Carlos Jiménez, Jaime Rodríguez.
Tetrahedron Lett. 2001, 42, 6699-6702

Carlos Jiménez. ”Marine sulfur-containing Natural Products” en Studies on Natural Products Chemistry”, Ed. Atta-ur.Rahman, Elsevier, Amsterdam, Vol. 25 Bioactive Natural Products (Part F), pp.811-917. ISBN: 0 08 044001 0, 2001.